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Sunday, February 14, 2010

The Flu Vaccine and Dystonia

 
This story has been posted on a number of blogs (Skepchick, ERV, Pharyngula) but it deserves even wider coverage.1

Do you remember the woman who claims to have been given dystonia by the flu shot? She had these strange symptoms of uncontrolled movement that were only relieved when she ran or walked backwards. At the time this was advertised as one of the important reasons to be "skeptical" of vaccinations (using the word "skeptical" as a synonym for "gullible"). Some of the students in my class last Fall were impressed enough to quote this case as evidence that there's something wrong with vaccines.

Well, it turns out that TV crews have been secretly taping Desiree Jennings and discovered that she now walks normally and even drives a car! Isn't that amazing! She was cured by some quack who injected her with vitamins and put her in a pressure chamber.

Unfortunately there were some side effects. She now speaks with a strange accent that sounds vaguely Australian—but only if you're not from Australia. This woman needs to see a psychiatrist.

The first video is the report from last October and the second is the recent expose.






1. Orac [Desiree Jennings & Dr. Buttar on Inside Edition] and Steve Novella [Well That Didn’t Take Long – Another Dystonia Case Follow Up] say thorough the scam from the very beginning.

Monday, February 01, 2010

Methodological Naturalism

Here's the abstract from a talk given by Maarten Boudry at the Darwin Conference in Toronto last November (see Good News from Gent).
Maarten Boudry, Ghent University
Methodological Naturalism as an Intrinsic Property of Science: A Grist to the Mill of Intelligent Design Theory

In recent rounds of debate between evolutionists and supporters of Intelligent Design, the principle of methodological naturalism (MN) has been an important battleground. Creationists and intelligent design proponents have previously claimed that the commitment of evolutionists to naturalism and materialism constitutes a philosophical prejudice on their side, because it rules out any kind of supernatural causes by fiat. In response to these charges, some philosophers and scientists have argued that science is only committed to something they call methodological naturalism: Science does not deal with supernatural causes and explanations, but that does not mean that the latter do not exist. However, there has been some philosophical discussion about the correct understanding of MN. The principle of MN is often conceived of as an intrinsic and self-imposed limitation of science, as something that is part and parcel of the scientific enterprise by definition. According to this view (Intrinsic MN or IMN) - which is defended by people like Eugenie Scott, Michael Ruse and Robert Pennock and has been adopted in the ruling of Judge John E. Jones III in the Kitzmiller vs. Dover case - science is simply not equipped to deal with the supernatural and therefore has no authority on the issue. It is clear that this depiction of science and MN offers some perspectives for reconciling science and religion. Not surprisingly, IMN is often embraced by those sympathetic to religion, or by those who wish to alleviate the sometimes heated opposition between the two.

However, we will argue that this view of MN does not offer a sound rationale for the rejection of supernatural explanations. Alternatively, we will defend MN as a provisory and empirically grounded commitment of scientists to naturalistic causes and explanations, which is in principle revocable by future scientific findings (Qualified MN or QMN). In this view, MN is justified as a methodological guideline by virtue of the dividends of naturalistic explanation and the consistent failure of supernatural explanations in the history of science.

We will discuss and reject four arguments in favour of IMN: the argument from the definition of science, the argument from lawful regularity, the science stopper argument, and the argument from procedural necessity. Moreover, we will argue that defining the supernatural out of science is a counterproductive strategy against ID creationism, and, for that matter, against any theory involving supernatural explanations. More specifically, IMN has been eagerly exploited by proponents of ID to bolster their false claims about the philosophical and metaphysical prejudices of evolutionists. As ID proponent Philip Johnson rhetorically noted, if science is about following the evidence wherever it leads, why should scientists exclude a priori the possibility of discovering evidence for the supernatural? Therefore, IMN is actually grist to the ID mill.
We conclude that IMN is philosophically artificial and that its attempt to reconcile science and religion is ill-conceived. QMN, alas, does not provide any such ready reconciliation either, but it does offer a sound rationale for the rejection of supernatural designers in modern science.
Here's the problem. You can't just arbitrarily restrict science to methodological naturalism. That's like ruling out supernatural explanations by fiat and not by logic. If God exists, then there's no reason why supernatural explanations can't be a legitimate part of science. This is one of the arguments made by Philip Johnson and it hasn't been adequately addressed by most philosophers.

But there's another problem with using methodological naturalism as a defense of accommodationism. How do draw the line between methodological naturalism and philosophical naturalism? Obviously, there's no difference for an atheist; in fact, the distinction seems rather silly. If supernatural explanations are never found to be necessary in explaining the natural world then doesn't it make sense to conclude that fairies and Santa Claus don't exist?

But for theists it's important to make a distinction so that they can adhere to methodological naturalism as scientists without having to abandon their belief in supernatural beings outside of the laboratory.

Where is the boundary and how do you tell when the line has been crossed? Accommodationists are absolutely convinced that they can tell the difference between methodological naturalism and philosophical naturalism but they are never very clear about explaining this difference to others.

Here's your chance. Let's see if anyone can come up with a good way of telling when the practice of methodological naturalism becomes philosophical naturalism.


Good News from Gent

While in Gent I got a chance to meet up with some members of the Department of Philosophy at the University of Gent. Jan Verbeeren (right) is a regular reader of Sandwalk. Stefaan Blanke (below left) and Maarten Boudry (below right) are graduate students who I met at the Darwin conference in Toronto in November.

It was easy to convince Maarten to join Jan and I for a beer because Jan was buying. Unfortunately, Stefaan couldn't make it so I'll have to go back for another visit.

There are at least 500 different beers made in Belgium—or so I'm told [Belgium beers]. I doubt that I'll be able to sample all of them before I leave. The ones I had in Gent were "Delirium Tremens" and "Tripel Karmeliet." They were excellent.


We talked about adaptationism vs. pluralism. It seems to be a difficult controversy to grasp if you haven't been trained as a scientist. I think the problem is that the concept of random genetic drift as a mechanism of evolution is not widely accepted among philosophers.

We also spent an hour or so talking about methodological naturalism and philosophical naturalism. This was the subject of Maarten's talk in Toronto last November and I think he's on to something (with Stefaan). I'll write a separate post on this topic.

The title of this post is from How They Brought the Good News from Ghent to Aix by Robert Browning.

I SPRANG to the stirrup, and Joris, and he;
I gallop’d, Dirck gallop’d, we gallop’d all three;
“Good speed !” cried the watch, as the gate-bolts undrew;
“Speed!” echoed the wall to us galloping through;
Behind shut the postern, the lights sank to rest,
And into the midnight we gallop’d abreast.

...



Sunday, January 31, 2010

Gravensteen

 
Gravensteen is one of the castles of the Count of Flanders. It's located in the middle of Gent (Ghent in English) and it's an excellent example of an early medieval castle (extensively restored).

Anyone descended from William the conqueror is also a descendant of the early counts of Flanders (Baldwin IV, V, VI, Arnulf II)1 since William married Matilda of Flanders, the daughter of Baldwin VI (1030 - 1070). These early counts built a wooden fort on the site of the present castle. The present stone structure dates from about 1180 [Gravensteen].

I especially liked the back of the castle where the kitchen was located because it hasn't been completely restored and you get an idea of what Gravensteen must have looked like for most of the last five hundred years.


Even though it was a cloudy day, the view from the ramparts was spectacular. Gent is a beautiful city.



We spent a great deal of time in the torture chamber and Ms. Sandwalk took lots of pictures of the various instruments used to "persuade" the prisoners. She also got pictures of the guillotine that was used in the late 1700's and early 1800's.

Here's one of the more pleasant images.


[Photo Credits: top [Wikipedia], all others are by Ms. Sandwalk.

1. Assuming, that is, that you are a descendant of one of his legitimate children.

Wednesday, January 20, 2010

Waterloo

 
Yesterday we took Zoë on her first major outing. We visited the site of the battle of Waterloo. Here's a photo of Jane, Michael, and Zoë in front of the entrance to the visitor center located on the ridge overlooking the farms of La Haye Sainte and Hougoumont. This was the location of some of the bloodiest fighting of the entire battle (Ney's cavalry charge and the attack of the Imperial Guard).

Today there's a huge artificial hill on the site. You can climb the stairs to the top and see the entire battlefield.


The last time I visited Waterloo was 35 years ago with our niece and nephew. Ever since I've wanted to take my own kids to see this famous site and yesterday was the day for Jane and my new granddaughter. My son Gordon will be so sad that he missed this battlefield () but since he'll be here in a few months I'm sure his sister will take him to Waterloo.

For more pictures, see Family Outing.








Tuesday, January 19, 2010

The Difference between Truth and Framing

 
Chris Mooney is at it again. This time he address the question What Should Science Organizations Say About Religion? Answer: A Lot.

It's the accommodationist debate all over again although this time it's more focused. What should scientific organizations say about the compatibility of science and religion? It seems like an question with an obvious answer. Since there is considerable debate about whether science and religion are compatible then there can't be a definitive answer. Why would any scientific organization claim that science and religion are compatible? It's not a scientific question and it's not a true statement. The correct statement is that philosophers are debating the issue. It may be true that science and religion are compatible or it may be true that science and religion are not compatible. That's all that scientific organizations should say.

Chris Mooney thinks that scientific organizations should not tell the truth. He says that in the interest of American politics these organizations should lie about the compatibility issue. They should say that science and religion are compatible. It's called "framing."

I call it lying.
Aware of this context, groups like the National Center for Science Education (NCSE) take a stance likely to help some religious believers reject what they’ve been told from the pulpit, and move toward a more moderate stance on science and religion–in essence, from anti-science fundamentalism to middle-ground reconciliationism. To this end, NCSE states something factually true and indeed, undeniable: that not every religious person thinks science and religion are incompatible.

The veracity of this statement is not really open to debate. The issue here is simply whether such people exist, and of that there’s no doubt whatsoever. In this blunt factual sense, at least, science and religion are compatible–they are reconciled all the time by actual living, breathing human beings. You might take issue with the logical basis for such reconciliation in a particular mind, but you can’t deny that it happens regularly.
Wow! According to this kind of "framing," science is compatible with Young Earth Creationism because it's undeniable that there are YEC's who are scientists. There are actual living breathing human beings who have no problem reconciling science and Genesis. I wonder if Chris Mooney would be comfortable if NCSE and NAS declared that science is compatible with the Bible?

Of course he wouldn't. Chris Mooney only wants scientific organizations to lie according to his version of reality.


A Philosopher's View of "Darwinism"

 
Most people think of "Darwinism" as equivalent to "evolution" but that can't be right. There are some mechanisms of evolutionary change—like random genetic drift—that clearly don't fall under the general beliefs of Darwin and his modern followers.

In today's terminology, Darwinism refers to a worldview that emphasizes natural selection as the most important mechanism of evolutionary change. Some extreme Darwinists even deny that change by random genetic drift counts as evolution.

Those of us who adhere to a broader view of evolution are called "pluralists" because we we consider several different mechanisms of evolution and several different levels of evolutionary change.

Jim Lennox is a philosopher. He has written a revised version of the "Darwinism" entry in Stanford Encyclopedia of Philosophy [Darwinism]. Now we all know that philosophers can be wordy, if it can be said by a normal person in two paragraphs then a philosopher can't possible write anything less than a small book. However, at the very least you expect to see a conclusion that makes sense. Is "Darwinism" a viable position in the 21st century? What does "pluralism" mean?

And wouldn't you expect a serious discussion of adaptationism and how it relates to Darwinism? I would.

Read the entry and see if you can decide whether "Darwinism" is a good synonym for "evolution."


[Hat Tip: John Wilkins]

Monday, January 18, 2010

Epigenetics and the Calico Cat

This is our friendly calico cat. She lives on the farm where we are staying. Almost all calico cats are female—do you know why? It has something to do with epigenetics.

See: Calico Cats—it's one of my most popular postings.

Can anyone explain how some very rare calico cats might be male?


[Photo by Ms. Sandwalk]

Name This Tree

 
Seriously, what kind of tree is this? It grows in Belgium.



[Photo by Ms. Sandwalk]

Who Does This Remind You Of?

 



[Photo by Ms. Sandwalk]

Monday, January 11, 2010

Herent Belgium

 
We're staying in a town called Herent, in Belgium. Our apartment is in a renovated manor house on a working farm (goats, chickens, ponies, cat).

Herent is a few kilometers north of Leuvan and only 20 minutes from Jane, Michael and our new granddaughter Zoë.

It's an easy drive back and forth except for the snow and Belgium drivers. Today we're off to our first babysitting job!!!!






Wednesday, January 06, 2010

Critical Thinking

 
Phil Plait of Bad Astronomy posted this video from QualiaSoup. It's one of the best descriptions of critical thinking I've ever seen. Critical thinking is what we're supposed to be teaching our students in school and university.

We're not doing a very good job.




Homeopathy and Avogadro's Number

 
Avogadro's Number, or it's more modern equivalent, Avogadro's Constant, is 6.022 × 1023 mol-1.

There's a new website called "Homeopathy: There's nothing in it" that explains why Avogadro's Number is important in understanding why homeopathy is a fraud.


[Hat Tip: Phil Plait]

Zoë Jane



This is my new granddaughter, Zoë Jane. Congratulations to my daughter Jane and her husband Michael. In a few hours we'll be flying to Paris then taking a train to Brussels to visit them. Meanwhile, there are more pictures at The First Picture's on Ms. Sandwalk's blog and a video of her first bath on Jane and Michael's blog [Zoë's First Bath].


Sunday, January 03, 2010

The Key Darwin and Design Science News Stories of the Year

 
The people at Access Research Network have compiled a list of the best stories of 2009. These are stories that lend support to the idea that God exists and that he plays an important role in creation of the universe.

The stories are supposed to fall into two categories; anti-science stories that cast doubt on modern scientific explanations, and stories about evidence supporting intelligent design creationism.

Here's the list from: “The Key Darwin and Design Science News Stories of the Year”. Judge for yourselves how many fall into each of the two categories.

  1. The Modern Synthesis is Gone
  2. Cell Motors Work in Concert
  3. Early Large Galaxies Stun Cosmologists
  4. The Ida Hype and Bust
  5. Walking White Blood Cells
  6. Signature in the Cell
  7. Cells Use Cloud Computing
  8. Peppered Moths Oscillates Back to Gray
  9. Reverse Engineering Biological Designs
  10. Cambrian Explosion Continues to Challenge Materialistic Theories
  11. The Collectivist Revolution in Biology
  12. Failed Assault on Irreducible Complexity
  13. Intelligent Input Required for Life
  14. The Edge of Evolution Confirmed
  15. The Ardi Hype and Bust



Communicating Science

 
The primary goal of science writers and science journalists is to be effective communicators of science. However, they have had little impact on the general public over the past few decades since the level of science literacy has barely budged.

Most citizens have little idea of how science works and many reject outright the basic fundamentals of science.

Having failed to achieve their goal, and finding themselves irrelevant when it comes to making a profit (largely because of their own failure), they are now looking for someone to blame. Chris Mooney has decided to blame scientists for not being science journalists. See his latest contribution at On issues like global warming and evolution, scientists need to speak up. He doesn't really mean "speak up" as scientists, of course. What he means is that scientists should learn how to "frame" and fudge their position in order to please the general public. Making friends with theists and promoting religious scientists is supposed to help.

What's interesting about this debate is that science writers like Chris Mooney are convinced they know how to teach the general public in spite of the fact that science writers—as a profession—have not been successful in the past.

Why should scientist listen to them?


Wednesday, December 30, 2009

How Long Does It Take to Recognize an IDiot?


Ken Ham is the man behind Answers in Genesis and the Creation Museum. He's upset with Lawrence Krauss because Krauss has been critical of anti-science creationists in general and the Creation Museum in particular. Ken Ham is particularly upset because Krauss was critical of th Creation Museum before he had actually visited it.
Krauss himself got criticism from some in the secular press because he had not even visited the museum to see it for himself. Presumably because of this criticism, he did come some time later and walked through the Creation Museum exhibits with AiG’s CCO, Mark Looy. Mark actually timed Krauss’s visit. He took a whole 22 minutes to walk through the museum, most of the time asking Mark Looy questions and only occasionally glancing at some of the exhibits. Considering it would take a person nearly one and a half hours to watch the programs in the various theatres, including the Planetarium and SFX theatre, plus take 2 hours to watch all the 50-plus videos in the various exhibits, and a further two hours to read all the signage—it was obvious Krauss wasn’t the least bit interested in researching the content of the museum (as one would expect from a real scientist and well-known anti-creationist commentator), but only visited presumably to tell people he has seen the Creation Museum and thus could comment on it—what a farce!
Now, let's be fair to Lawrence Krauss. He's a very smart guy and I'm certain that it didn't take him 22 minutes to recognize that the museum was a farce. I'm sure he stayed an extra 21 minutes just to be polite to his host.



Thursday, December 17, 2009

Time Magazine's Top 10 Scientific Discoveries


Here's the list of Time Magazine's Top 10 Scientific Discoveries. Given all the hype about The Darwinius Affair last May it's amazing that the discovery of this fossil didn't make the list.

There were several other huge scientific breakthroughs that failed to make the list: proof that Darwin was wrong, the overthrow of evolutionary theory, exposing the fraud of climate change, and the publication of Unscientific America.

There are some real scientific stories that were ignored by Time magazine: the creation of artificial stem cells (continuing), the 150th anniversary of the publication of Origin of Species, Nobel Prizes for telomeres and ribosome structure, and rapid human genome sequencing.

1. Our Oldest Ancestor, "Ardi"
2. The Human Epigenome, Decoded
3. Gene Therapy Cures Color Blindness
4. A Robot Performs Science
5. Breeding Tuna on Land
6. Water on the Moon
7. The Fundamental Lemma, Solved
8. Teleportation!
9. The Large Hadron Collider, Revived
10. A New Planet (or Brown Dwarf?) Discovered

It looks like a bad year for science if this is the best of the best.

In case you've forgotten, here's the top 10 list from last year [2008].

1. Large Hadron Collider
2. The North Pole — of Mars
3. Creating Life
4. China Soars into Space
5. More Gorillas in the Mist
6. Brave New Worlds
7. The Power of Invisibility
8. Cenozoic Park?
9. Can You Spell Science?
10. First Family


Tuesday, December 15, 2009

Does Excess Genomic DNA Protect Against Mutation?

Many eukaryotic genomes have a large amount of "excess" DNA that doesn't have any of the functions we normally assign to DNA (protein-coding, regulatory, origins of replication, centromeres, RNA genes etc.). Many of us think this is junk DNA. It has no function and could easily be dispensed with.

One of the adaptive explanations for this excess DNA is that it protects the functional DNA from mutations. Ryan Gregory thinks this is a serious scientific hypothesis even though he's skeptical. He has a wonderful post that reviews the history of the idea and how the hypothesis should be tested [Does junk DNA protect against mutation?].

The bottom line is that this hypothesis is not taken very seriously by the scientific community for some very good reasons.

First, most spontaneous mutations in the germ line seem to be due to errors in DNA replication. The overall rate of evolutionary change is consistent with the mutation rate of DNA replication + repair, suggesting that it is the dominant form of mutation. This mutation rate is based on the number of nucleotides replicated. What this means is that the rate of mutation in functional DNA is independent of how much other DNA is being replicated. Excess DNA offers no protection from the spontaneous error rate of DNA replication.

THEME

Genomes & Junk DNA
However, the protection hypothesis may be applicable to other kinds of mutation such as those caused by chemicals or ionizing radiation. In multicellular organisms such as animals, fungi, and plants, this possible protection may prolong the lifetime of somatic cells or prevent them from becoming deregulated (e.g., cancer).

The idea is that excess DNA may shield the functional DNA from the effects of these mutagens but this would only work if the excess DNA was specifically organized so that it surrounded the functional DNA and provided physical shielding. There's no evidence that this is the case and, furthermore, it doesn't make much sense. The functional DNA in a nucleus is already shielded by lots of proteins, lipids and membranes so it's unlikely that a bit more DNA is going to make a difference.

Not only that, but some kinds of DNA damage caused by these mutagens will cause strand breakage. What does that mean? It means that the larger the genome the greater the chance that damage will occur. In other words, excess DNA leads to greater rates of mutation, not lower rates of mutation, for those types of mutagens. Ryan Gregory shows results from several studies during the 1970s that establish that fact.

I sympathize with Ryan's call for experimental support of the hypothesis but I'd also like to point out that not only does it not have direct evidence to back it up but it's not even theoretically feasible. It's just a bad hypothesis based largely on a misunderstanding of mutations and how they arise.

Also, the protection hypothesis doesn't pass The Onion Test which is one of the first requirements for an adaptive explanation of junk DNA.


On the Evolution of Homosexuality

 
A reader alerted me to a posting by Greta Christina on The Blowfish Blog.1 She discusses Why Did Gayness Evolve?.

This is not your ordinary posting on the topic. For one thing, she acknowledges that you can only discuss the evolution of homosexuality if there's a significant genetic component. She makes the assumption that there is a genetic component but it is not proven.

From that point on, her analysis of the possible reasons for evolving homosexuality is as good as it gets. Greta Christina avoids the obvious clichés and concentrates on real biology. The words "spandrels" is used a lot.

This is someone who understands evolution. Speaking of understanding evolution, in order to discuss whether homosexuality evolved you need to have a workable definition of evolution. My definition restricts evolution to heritable changes in a population and that's why the discussion of a possible genetic component is relevant.

Some people prefer a different definition of evolution—something like "descent with modification." I wonder how you can discuss the possible evolution of homosexuality using such a definition of evolution? Would it mean that the increased prevalence (and acceptance) of homosexual behavior in ancient societies was an example of evolution?


1. Thank-you Fred.

Thursday, December 10, 2009

Why Are Americans Religious?

 
One of the major questions in 21st century sociology is why are Americans so much more religious than citizens in other industrialized nations. The answer, if there is one, will help us understand why evolution is rejected by so many Americans.

Gregory S. Paul is a writer who has long been interested in this question. His latest contribution is published in the journal Evolutionary Psychology (Paul, 2009).

Paul examined the correlation between religiosity and the Successful Societies Scale (SSS). SSS measures things like crime rates, divorces, mortality rates etc. The United States (U) seems like an outlier compared to other countries.

Does belief in God cause a society to be dysfunctional or are less successful countries more likely to encourage religiosity? Or is there no obvious cause and effect behind this correlation?

You'll have to read the paper to see how Gregory Paul address these questions and how he rules out many possible explanations. I find his conclusion quite intriguing—I never thought of it this way.
Among the prosperous democracies all but the U.S. have adopted most or all of a set of pragmatic progressive governmental policies that have elevated these nation’s societal efficiency, success and security while reducing personal levels of stress and anxiety. These include reduced socioeconomic disparity and competition via targeted tax and welfare strategies, handgun control, anti-corporal punishment and anti-bullying policies, protection for women in abusive relationships, intensive sex education that emphasizes condom use, rehabilitative incarceration, increased leisure time that can be dedicated to family needs, and perhaps most importantly job security and universal health care that make it difficult for ordinary citizens to suffer catastrophic financial failure. Social ills are correspondingly suppressed. As a member of the 1st world the U.S. is an anomalous outlier not only in its religiosity, but in social, economic and political policies as well. Provided with comparatively low levels of government support and protection in favor of less restrained capitalism, members of the middle class are at serious risk of financial and personal ruin if they lose their job or private health insurance; around a million go bankrupt in a year, about half due in part to often overwhelming medical bills. The need to acquire wealth as a protective buffer encourages an intense competitive race to the top, which contributes to income inequality. The latter leaves a large cohort mired in poverty. Levels of societal pathology are correspondingly high. The evidence indicates that the modulation of capitalism via progressive policies is producing superior overall national circumstances compared to the more laissez-faire capitalism favored in the U.S.
       The relationship of religion to these patterns appears to be both passive and active. Starting with the passive, the middle class majorities of western Europe, Canada, Austro-Zealand and Japan apparently feel sufficiently secure in their lives that increasingly few citizens feel a need to seek the aid and protection of a supernatural creator, resulting in dramatic drops in religious belief and activity (Norris and Inglehart, 2004; Paul and Zuckerman, 2007; Zuckerman, 2008). With the implosion of the general religious belief, few subscribe to a fundamentalist world-view that provides the base for creationist opinion,. That there are no major 1st world exceptions to this pattern, and that a significant religious revival has yet to occur in a secular democracy, indicate that the socioeconomic security process of democratic secularization is highly effective even though it is an accidental side effect of progressive economic policies. The universality of the effect is further supported by Asian Japan experiencing the same basic secularization process as the EuroChristian heritage secular democracies. America’s high-risk circumstances, the strong variation in economic circumstances, and chronic competitiveness help elevate rates of social pathology, and strongly contribute to high levels of personal stress and anxiety. The majority of Americans are left feeling sufficiently insecure that they perceive a need to seek the aid and protection of a supernatural creator, boosting levels of religious opinion and participation. The nation’s good ratings in life satisfaction and happiness is compatible with a large segment of the population using religion to psychologically compensate for high levels of apprehension; America’s apparently high level mental illness (Bijl, 2003) may be in accord with this suggestion. The ultimate expression of this social phenomenon is the large minority who adhere to the evangelical Prosperity Christianity and Rapture cultures whose Bible-based world-view favors belief in the Genesis creation story. The results of this study are therefore compatible with and support the socioeconomic security hypothesis of democratic secularization.
Sue Blackmore is intrigued but skeptical [Are we better off without religion?]. She thinks this may be too simplistic and of course she's right. There's no one reason why America is lagging behind other nations in evolving a better society and there's no single explanation for its religiosity.

But I still think Paul's point is worth considering.


Paul, G.S. (2009) The Chronic Dependence of Popular Religiosity upon Dysfunctional Psychosociological Conditions. Evolutionary Psychology 7: 398-441. [PDF]

Friday, December 04, 2009

Quoting Bertrand Russell

 
Jason Rosenhouse has posted a quotation from Bertrand Russell [Quote for the Day]. Like Jason, I am a fan of the great man. Here's my quotation—it's from an essay written in 1940, shortly after Russell was declared unfit to teach at City College in New York.
A man or woman who is to hold a teaching post under the state should not be required to express majority opinions, though naturally a majority of teachers will do so. Uniformity in the opinions expressed by teachers is not only not to be sought but is, if possible, to be avoided, since diversity of opinion among preceptors is essential to any sound education. No man can pass as educated who had heard only one side on questions as to which the public is divided. One of the most important things to teach in the educational establishments of a democracy is the power of weighing arguments, and the open mind which is prepared in advance to accept whichever side appears the most reasonable. As soon as a censorship is imposed upon the opinions which teachers may avow, education ceases to serve this purpose and tends to produce, instead of a nation of men, a herd of fanatical bigots.
 

What Do These Things Have in Common?

 
What do these two images have in common? You'll have to read Ms. Sandwalk's blog to find out [One Month to go]. Next month will be very exciting. I'll be spending all of January in Belgium.




Defining Evolution in Anthropology Textbooks

Here's one of the most interesting articles in the current edition of Evolution: Education and Outreach.
White, J., Tollini, C.D., Collie, W.A., Strueber, M.B., Strueber, L.H., and Ward, J.W. (2009) Evolution and University-level Anthropology Textbooks: The “Missing Link”? Evo. Edu. Outreach 2:722–737 [doi: 10.1007/s12052-009-0176-6]

Abstract: Although studies analyzing the content of evolution curriculum usually focus on courses within the context of a biological sciences department or program, research must also address students and courses outside of the biological sciences. For example, using data solely from biological courses will not fully represent the scope of coverage of evolution in university education, as other fields, like anthropology, also utilize evolutionary principles. We analyzed the content of 31 university-level anthropology textbooks for the following: (1) presence of a definition of evolution in various sections of the textbooks, (2) accuracy and consistency of the definitions provided in the textbook sections, and (3) differences between textbooks for cultural and physical anthropology. Results of this study suggest that anthropology textbooks do not necessarily (1) provide a single definition of evolution or (2) provide an accurate, “baseline” definition of evolution when present. Additionally, substantive differences were observed between definitions provided in different sections within a single textbook, as well as between textbooks written for cultural anthropology and physical anthropology/archaeology courses. Given the inclusion of anthropology courses in general education curriculum at the university-level, we conclude that this situation may further exacerbate the misunderstanding of the basic tenets of evolution that university students have been repeatedly shown to demonstrate. We stress the role of the instructor in choosing textbooks that provide accurate information for students, as well as the responsibility they hold in providing a concise, accurate definition of evolution in social sciences courses.
The authors refer to an earlier study by Linhart (1997) who examined definitions of evolution in biology textbooks.
In our literature search, we were able to locate only one study that directly addressed the coverage of evolution in textbooks. Linhart (1997) focused on textbooks designed for one of the following six courses in the biological sciences: general biology (for majors and non-majors), evolution, genetics, paleontology, ecology, and systematics. He restricted his sample to 50 textbooks that had multiple editions and a sizable market share, and he located at least some of these textbooks using colleagues’ recommendations. He analyzed the content of the glossary entry for evolution in each textbook, as well as the material in any pages listed in an index entry for evolution, and compared these data against a definition of evolution he constructed after reviewing the literature:
Evolution is said to have occurred within a species, lineage, or population when measurable changes in various morphological, physiological, behavioral, or biochemical characteristics can be detected. These characteristics must be at least partly under genetic control. The genetic change(s) can occur as a
consequence of processes such as migration, mutation, genetic drift or bottleneck, natural selection, and nonrandom mating. Genetic changes within different populations of a species can lead to differences among lineages, and sometimes to the origin of new species...Evolution is not a synonym of natural selection. Nor is evolution a process that leads inevitably to increased or improved adaptation, or to greater reproductive success. Evolution does not imply a progressively closer fit between a population and its environment. Finally, evolution does not involve predictable or irrevocable changes from simple to more complex forms or toward some sort of perfection (Linhart 1997: 387).
While he found variation between the textbooks written for the six different courses in his sample, his findings indicated that the majority of all of the textbooks equated evolution with natural selection or adaptation and did not describe evolution in much detail. Linhart (1997) expressed much concern regarding the content of the definition of evolution in these textbooks, arguing that many students will have an inaccurate or incomplete view of evolution unless they are provided with additional material.
I agree with the problems that Linhart outlines and I agree that evolution needs to be defined as a process that involves genetic change and populations. It's very important that evolution should be defined in a way that allows for multiple mechanisms such as natural selection and random genetic drift.

Most of the biology textbooks I've read do an adequate job of defining evolution but I haven't covered as many textbooks as Linhart.

It's disappointing that biology textbooks and anthropology textbooks do such a poor job of defining—and presumably explaining—evolution. Is it any wonder that the general public is scientifically illiterate when we can't even get it right in the textbooks?


Linhart, Y. (1997) The teaching of evolution: we need to do better. Bioscience 47:385–91.

Evolution According to Niles Eldredge

 
I've read all of the books by Niles Eldredge. He's one of my favorite science authors [Good Science Writers: Niles Eldredge]. However, I've never really understood exactly what he means when he talks about evolution. He's not a molecular biologist or a geneticist but does he understand the basics of these disciplines? Does he think of evolution as a branch of population genetics or something else? Does he know about random genetic drift?

Some of these questions have been answered in an article that he co-authors with his son in the latest issue of Evolution: Education & Outreach. This is a journal dedicated to teaching evolution correctly. The article outlines a universal evolution curriculum for all grades from kindergarten to university [Lessons from EEO: Toward a Universal Evolutionary Curriculum].
Abstract We propose a human-centered evolutionary curriculum based around the three questions: Who am I? Where do I come from? How do I fit in? We base our curriculum on our experiences as an evolutionary biologist/ paleontologist (NE) and as a secondary level special education science teacher (GE)—and not least from our joint experience as co-editors-in-chief of this journal. Our proposed curriculum starts and ends with human biology and evolution, linking these themes with topics as diverse as the “tree of life” (systematics), anthropology, Charles Darwin, cultural evolution, ecology, developmental biology, molecular evolution/genetics, paleontology, and plate tectonics. The curriculum is “universal” as it is designed to be taught at all levels, K–16. The curriculum is flexible: “modules” may be expanded and contracted, reordered, or modified to fit specific grade level needs—and the requirements and interests of local curricula and teachers. We further propose that students utilize workbooks from online or printed sources to investigate the local answers to the general questions (e.g., “Who am I?”), while classroom instruction is focused on the larger scale issues outlined in the modules of our curriculum.
I don't like the idea of teaching evolution from a human-centered perspective. Our students are certainly used to thinking of biology only in terms of themselves, but isn't it our goal as educators to teach them that this is wrong?

It's the age-old question of whether the best way of teaching is to cater to student misconceptions or confront them.

A key part of any evolution curriculum is defining evolution. I prefer a scientific definition that allows us to distinguish evolution from other process that may look like evolution. The minimal definition is derived from population genetics and it allows us to recognize that different frequencies of blood groups in different human populations is evolution [What Is Evolution?].

Eldredge prefers a different definition in his evolutionary curriculum ...
What is “evolution?” Evolution is the testable, scientific idea that all species of life on Earth are descended from a common ancestor living billions of years ago since life first began on Earth. You can think of evolution as the history of life on Earth—or even as the fate of genetic information through time.

Module 3: What Is Evolution? How Do Humans Fit into the History of Life?

I've always taught that evolution is a process and that it's distinctly different from the history of life. It's like the difference between gravity and the history of our solar system. The formation of our solar system was a unique event that relied upon, and can be explained by, gravity and other general processes. Similarly, the history of life on Earth is a unique event. It can be explained by evolution and other processes but it's not the same as "evolution."

As far as I know, there are no evolutionary biology textbooks that define evolution as the history of life. The Eldredges are proposing a curriculum that's out of sync with most pedagogical approaches to evolution. Is this a better way to teach evolution? I don't think so.

Module 3 also covers the mechanisms of evolution. Adaptation and natural selection are mentioned but the authors go on to say that natural selection is not the only evolutionary process. The others are: speciation, punctuated equilibria, and mass extinctions.

I've always suspected that Niles Eldredge discounts random genetic drift as a legitimate process of evolution. This confirms my suspicion.

I'm very concerned about the content of this article and it's publication in a journal that's devoted to evolution education. If this is what the experts on evolution education are touting as the ideal curriculum then there are only two possible conclusions: (1) they aren't experts, or (2) I'm dead wrong about everything that I've been teaching.

I'm almost afraid to open up the comments on this posting for fear that (2) is the correct answer.



Wednesday, December 02, 2009

Comparison and Adaptation

 
As most of you know, Richard Dawkins is not a fan of the Spandrels paper by Gould and Lewontin [A Critique of the Adaptationist Programme]. A reader has alerted me to a comment that Richard Dawkins posted on Jerry Coyne's blog.

Dawkins said [I was there ...].
I was there (one of the speakers) at the London meeting of the Royal Society, where the Spandrels paper was first presented (by Gould; Lewontin didn’t come). Before Gould spoke, the talk by Clutton-Brock and Harvey substantially anticipated the Spandrels paper and undermined its central thesis. All of us were eager to hear how Gould would deal with Clutton-Brock and Harvey’s devastating critique of what they guessed (from previous publications) he would say. In the event, Gould totally ignored Clutton-Brock and Harvey, and gave his prepared paper, playing for horse laughs from the gallery, as if nothing had happened. It was the beginning of my disillusionment with Gould, whom I had previously respected. Please, if you read the Spandrels paper, look first at the Clutton-Brock and Harvey paper, in the same volume published by the Royal Society, 1979.
I had not heard of this paper by Clutton-Brock and Harvey and I'm not familiar with their work. Here's the reference and the abstract—it doesn't look to me like a devestating critique of Gould and Lewonton's paper.

Clutton-Brock, T.H. and Harvey, P.H. (1979) Comparison and Adaptation. Proc. R. Soc. Lond. B 205:547-565. [doi: 10.1098/rspb.1979.0084]
It has sometimes been suggested that the term adaptation should be reserved for differences with a known genetic basis. We argue that adaptation should be defined by its effects rather than by its causes as any difference between two phenotypic traits (or trait complexes) which increases the inclusive fitness of its carrier. This definition implies that some adaptations may arise by means other than natural selection. It is particularly important to bear this in mind when behavioural traits are considered. Critics of the 'adaptationist programme' have suggested that an important objection to many adaptive explanations is that they rely on ad-hoc arguments concerning the function of previously observed differences. We suggest that this is a less important problem (because evolutionary explanations generally claim some sort of generality and are therefore testable) than the difficulties arising from confounding variables. These are more widespread and more subtle than is generally appreciated. Not all differences between organisms are directly adapted to ecological variation. The form of particular traits usually constrains the form or value that other traits can take, presenting several obstacles to attempts to relate variation in morphological or behavioural characteristics directly to environmental differences. We describe some of the repercussions of differences in body size among vertebrates and ways in which these can be allowed for. In addition, a variety of evolutionary processes can produce non-adaptive differences between organisms. One way of distinguishing between these and adaptations is to investigate adaptive trends in phylogenetically different groups of species.


Vegetarian Nobel Laureates

I'm sure you've all been dying to know how many Nobel Laureates were vegetarians. Well, here's the answer. It was was on the back of a flyer received by one of the Skepchicks [An Appeal to Chickens and Other Logical Fallacies]. She's asking you to review the front part of the flyer to see how many logical fallacies you can identify.

It's interesting that only one Nobel Laureate won the Noble Prize for Physiology or Medicine. I guess the "logic" behind being a vegetarian isn't as obvious to biologists as it is to writers of fiction.




Name These Geneticists

This is a collection of "geneticists" from the latest issue of Genetics (November 2009). How many can you identify? The correct answers are here.





Tuesday, December 01, 2009

What Can't You Do in the House of Commons?

 
Almost anything goes in Ontario's House of Commons and debates can be rather lively. However, tradition (and House rules) state that you cannot accuse someone of lying. Here's what happens if you break that rule.



Ted Chudleigh is the Conservative MPP for Halton—a district that includes Oakville and Milton. He's ranting about a proposal to harmonize the GST and PST taxes.

Jennifer Smith lives in Milton and she's on the case. A little digging led her to this quotation from a speech by Ted Chudleigh in the House of Commons only 14 months ago [Ted Chudleigh on the HST: What a Difference a Year Makes].
Taxing businesses for their input costs is also a negative thing to do in an economy. It would be far better if we could find a way to harmonize the PST with the GST." (October 2, 2008 - Legislative Assembly Hansard)
Oh, dear. Is it possible that Mr. Chudleigh is a liar? Or is he just a hypocrite?


A Critique of the Adaptationist Programme

The Royal Society of Britain has opened access to a number of classic papers that have been published in Proceedings of the Royal Society. One of them is ...
Gould, S. J. and Lewontin, R.C. (1979) The Spandrels of San Marco and the Panglossian Paradigm: A Critique of the Adaptationist Programme. Proc. R. Soc. Lond. B 205:581-598. [doi: 10.1098/rspb.1979.0086]

Abstract: An adaptationist programme has dominated evolutionary thought in England and the United States during the past 40 years. It is based on faith in the power of natural selection as an optimizing agent. It proceeds by breaking an organism into unitary 'traits' and proposing an adaptive story for each considered separately. Trade-offs among competing selective demands exert the only brake upon perfection; non-optimality is thereby rendered as a result of adaptation as well. We criticize this approach and attempt to reassert a competing notion (long popular in continental Europe) that organisms must be analysed as integrated wholes, with Bauplane so constrained by phyletic heritage, pathways of development and general architecture that the constraints themselves become more interesting and more important in delimiting pathways of change than the selective force that may mediate change when it occurs. We fault the adaptationist programme for its failure to distinguish current utility from reasons for origin (male tyrannosaurs may have used their diminutive front legs to titillate female partners, but this will not explain why they got so small); for its unwillingness to consider alternatives to adaptive stories; for its reliance upon plausibility alone as a criterion for accepting speculative tales; and for its failure to consider adequately such competing themes as random fixation of alleles, production of non-adaptive structures by developmental correlation with selected features (allometry, pleiotropy, material compensation, mechanically forced correlation), the separability of adaptation and selection, multiple adaptive peaks, and current utility as an epiphenomenon of non-adaptive structures. We support Darwin's own pluralistic approach to identifying the agents of evolutionary change.
If you haven't read this paper by now then download it and read it carefully. It's the most important paper to read if you are interested in evolution.

Jerry Coyne agrees, "Read the rest; it’s certainly one of the most important papers in modern evolutionary biology." [It’s a spandrel (sort of . . .)!].

He also says,
This paper is famous because the authors were famous, because it’s very well written, but most of all because it posed a direct attack on the “Panglossian paradigm”: the view that sociobiology wants to explain all traits, particularly human behaviors, as the direct products of selection. This paper has been the subject of furious discussion and at least one book. In my view, the paper made some valid points but went overboard in its criticism of the adaptationist program, which, after all, has produced lots of insights about evolution. I knew Gould, who was on my thesis committee, and it always seemed like pulling teeth to get him to admit that natural selection was even a relatively important force in evolution. If pressed, he would, but Gould always preferred (perhaps for political reasons) to emphasize the limitations of selection. Lewontin was not nearly so extreme.
It's true that the adaptationists have produced some valuable insights when the problem they are examining is actually an adaptation. However, this isn't as significant as you might imagine. Think of it like this. Everything looks like a nail when you have a large hammer in your hand. The fact that some things actually turn out to be nails is no excuse for blindly whacking at everything that sticks up.

Gould and Lewontin advocated a pluralist position where many different kinds of explanations should be considered. They note that Darwin himself was not committed to natural selection as the only possible mechanism of evolution.
Since Darwin has attained sainthood (if not divinity) among evolutionary biologists, and since all sides invoke God's allegiance, Darwin has often been depicted as a radical selectionist at heart who invoked other mechanisms only in retreat, and only as a result of his age's own lamented ignorance about the mechanisms of heredity. This view is false. Although Darwin regarded selection as the most important of evolutionary mechanisms (as do we), no argument from opponents angered him more than the common attempt to caricature and trivialize his theory by stating that it relied exclusively upon natural selection. In the last edition of the Origin, he wrote (1872, p. 395):

"As my conclusions have lately been much misrepresented, and it has been stated that I attribute the modification of species exclusively to natural selection, I may be permitted to remark that in the first edition of this work, and subsequently, I placed in a most conspicuous position-namely at the close of the introduction-the following words: "I am convinced that natural selection has been the main, but not the exclusive means of modification." This has been of no avail. Great is the power of steady misinterpretation."




[Hat Tip: Pharyngula: Oldie moldies that are pretty darned fascinating]

On Determining the Structure of a Protein


Michael Clarkson is a biotech postdoc who blogs at Discount Thoughts. One of his recent thoughts is Don't look for "the" structure. He is referring to the fact that the crystal structure of a protein doesn't actually represent the only structure that the protein can adopt.

The figure shown here illustrates one of the problems with referring to the structure of a protein. This is a representation of an NMR structure of bovine ribonuclease A. It shows that various parts of the protein exist in several different conformations. The actual protein structure is a composite of all these structures in equilibrium with each other.

These conformation could be considered "breathing" and you may think they're not important. However, there are many cases where the conformations of a protein are quite different. We are familiar with allostery, where the conformation of a protein changes when it's bound to a ligand, but the are also examples where two very different structures exist in equilibrium in the absence of ligand.

Read his blog posting and keep in mind that proteins are dynamic structures and not static rigid crystals.



FOX News Pie Chart

 
One of Ms. Sandwalk's ancestors was William Playfair who invented the pie chart [Bar Graphs, Pie Charts, and Darwin]. That was in 1786.

FOX News has heard of the concept but they don't quite seem to have mastered the technique.




[Hat Tip: GrrlScientist]

The Cutest of all Invertebrates


Catalogue of Organisms features these cute little animals on "Taxon of the Week."

If you follow the link on that blog to a more detailed overview of the taxon you get a bonus—a description of why Christopher Taylor didn't make it to the International Conference of Arachnology in Brazil.





Wednesday, November 25, 2009

Origin of Species at 150: Day Three

Tuesday November 24, 2009

08:00-09:00 Breakfast

09:00-11:00
Symposium V: Taxonomy
Chair: TBA

09:00-09:40
Mary Winsor (University of Toronto)
"Classification is a Census:" Huxley's Private Quarrel
with Darwin and its Public Consequences

09:40-10:20
Kevin Padian (University of California, Berkeley)
What is "Evidence for Evolution" to an Evolutionist?

10:20-11:00
Richard A. Richards (University of Alabama)
Context and Evidence in the History of Science

11:15-12:45
Session 4.i: Ancient Debates, Ancient Roots
Chair: Charissa Varma

11:15-11:45
P. William Hughes (Carleton University)
Aristotle contra Democritus: Anticipation of the Neutralist-Selectionist
Debate and a Haphazard Route Back to Darwin

11:45-12:15
Andreas Avgousti (Columbia University)
Pre-modern, Modern and Natural Understandings of Man:
Plato, Hobbes, and Evolutionary Theory

12:15-12:45
Robin Zebrowski (Beloit College)
The Evolution of Experience and the Experience of Evolution:
Revisiting Dewey's Analysis of the Influence of Darwin on Philosophy

11:15-12:45
Session 4.ii: The Devil’s Chaplain
Chair: David Smillie

11:15-11:45
Peter Sachs Collopy (University of Pennsylvania)
Naturalizing Calvinism: The Darwinism and Anti-Evolutionism
of George Frederick Wright

11:45-12:15
Stephen D. Snobelen (University of King’s College)
Theological Themes in Darwin's Origin of Species (1859)

12:15-12:45
Christopher diCarlo (University of Ontario Institute of Technology)
The Zing of Perceived Control: Memetic Equilibrium
and the Evolution of Religion

11:15-12:45
Session 4.iii: Laws of Evolutionary Economics
Chair: Mike Thicke

11:15-11:45
André Ariew (University of Missouri-Columbia)
Darwin’s Invisible Hand?

11:45-12:15
Eugene Earnshaw-Whyte (University of Toronto)
Breaking the Bonds of Biology: Natural Selection
in Nelson and Winter's Evolutionary Economics

12:15-12:45
Chris Haufe (Virginia Polytechnic Institute and State University)
Darwin’s “Laws”

12:45-13:30 Lunch Break

13:40-15:40
Symposium VI: Evolution and Development
Chair: Jean-Bernard Caron

13:40-14:20
Manfred Laubichler (Arizona State University)
From Boveri to Davidson and Back

14:20-15:00
Jane Maienschein (Arizona State University)
From Epigenesis to Epigenetics and Back

15:00-15:40
Michael Dietrich (Dartmouth College)
From Goldschmidt to Gould and Back

15:50-17:20 Session 5.i: It's All in the Mind
Chair: Eugene Earnshaw-Whyte

15:50-16:20
Byron Kaldis (The Hellenic Open University)
Species-Qua-Individuals and the Modularity of the Mind: The Saving Grace for Humans

16:20-16:50
Alain Ducharme & Sheldon Chow (The University of Western Ontario
Keeping Darwin in Mind

16:50-17:20
Steve DiPaola (Simon Fraser University)
Darwin, Creativity, and Evoluionary Programming

15:50-17:20
Session 5.ii: International Receptions
Chair: Ari Gross

15:50-16:20
Paranbes Nath (Calcutta University)
Darwin and India

16:20-16:50
Alex Levine & Adriana Nova (University of South Florida)
The Fate of Darwinian Analogies in Latin America:
The Reception of Darwinism in 19th Century Argentina

16:50-17:20
Nolan Heie (Queen’s University)
Albert Kalthoff, Entwicklung and the "World View of Modern Man"

15:50-16:50
Session 5.iii: Fitness
Chair: Ellie Louson

15:50-16:20
Marshall Abrams (University of Alabama at Birmingham)
Individuals have no Fitnesses if Fitness Differences Cause Evolution

16:20-16:50
Kent A. Peacock (University of Lethbridge)
The Three Faces of Fitness

15:50-16:50
Session 5.iv: Language and Logic
Chair: S.J. Patterson

15:50-16:20
Alexander G. Yushchenko (Kharkov State Polytechnic University)
Logics & Ethics of Evolution from the Point of View of Evolutionary Theology

16:20-16:50
Justin Humphreys (New School for Social Research)
Darwin on Language

17:20-18:20
Keynote Address: Brian K. Hall (Dalhousie University)
Charles Darwin, Evolutionary Embryology and Evo-Devo


18:20-19:00 Break

19:00-19:45
Keynote Address: Spencer Barrett (University of Toronto)
Charles Darwin and Current Perspectives on the Evolution and Function of Plant Sexual Diversity


Origin of Species at 150: Day Two

Monday November 23, 2009

09:00-11:00Symposium III: Theistic Evolution
Chair: Michael Bourgeois

09:00-09:40
Bernard Lightman (York University)
Christian Evolutionists in the U.S., 1860-1900

09:40-10:20
Michael Ruse (Florida State University)
Are Science and Religion Compatible and If So, Why?

10:20-11:00
Denis O. Lamoureux (University of Alberta)
Darwinian Theological Insights: Toward an Intellectually Fulfilled Theism

11:15-12:45
Session 2.i: Acceptances and Denials
Chair: David Smillie

11:15-11:45
Fermin Fulda (University of Toronto)
Against Fodor Against Darwinism

11:45-12:15
Stefaan Blanke (Ghent University)
"A million guesses strung together:" Creationist Denial of the Science Behind Evolutionary Theory

12:15-12:45
Daniel A. Newman (University of Toronto)
The Rhetoric of Probability: How Darwin Overcame the Argument from Design

11:15-12:45
Session 2.ii: Historical Receptions
Chair: Jaipreet Virdi

11:15-11:45
John Court (University of Toronto)
Darwinian Evolution's First Fifty Years of Impact
on Botany at the University of Toronto. 1859 to 1909

11:45-12:15
David M. Steffes (Arizona State University)
Population Ecology and Evolution: Darwin's Origin and the
Modern Synthesis of the 1940s and 50s

12:15-12:45
Kevin Pent (York University)
Julian Huxley's 'Apogee of Species': Darwin's 'Man' Comes of Age

11:15-12:45
Session 2.iii: A Brave New Darwin
Chair: Chris Belanger

11:15-11:45
Peter Fedor (Comenius University)
Advances in Artificial Intelligence in Species Identification

11:45-12:15
Wybo Houkes (Edinhoven University of Technology)
Hypothesis Testing in Artefact Evolution

12:15-12:45
Laura Landen (Queen's University)
Natural Selection, The Intentional Stance, and Mirror Neuron Research

12:45-13:30 Lunch Break

13:40-15:40
Symposium IV: Species
Chair: Ronald de Sousa

13:40-1420
John Beatty (University of British Columbia)
Darwin on Species

14:20-15:00
Kevin de Queiroz (Natural Museum of National History; Smithsonian)
Charles Darwin and the Evolution of the Species Concept

15:00-15:40
Marc Ereshefsky (University of Calgary)
Mystery of Mysteries: Darwin and the Species Problem

15:45-16:45
Keynote Address: Michael Ruse (Florida State University)
Is Darwinism Past its “Sell-By” Date?

16:45-18:15
Session 3.i: Naturalism
Chair: Curtis Forbes

16:45-17:15
Jason Marsh (University of Western Ontario)
Darwinism and Divine Hiddenness

17:15-17:45
Khaldoun Sweis (Olive-Harvey College)
Philosophical Paradoxs of Darwin Evolutionary Naturalism

17:45-18:15
Maarten Boudry (Ghent University)
Methodological Naturalism as an Intrinsic Property of Science:
A Grist to the Mill of Intelligent Design Theory

16:45-18:15
Session 3.ii: Reconstructing Darwinism
Chair: Erich Weidenhammer

16:45-17:15
Peter Gildenhuys (Lafayette College)
Putting the Struggle for Existence to Work

17:15-17:45
Katharine Browne (University of Toronto)
A Darwinian theory of Games

17:45-18:15
Sarah Winter (University of Connecticut Storrs)
Species as Value: Biosemiotics in Darwin's Origin and Saussurian Linguistics

16:45-18:15
Session 3.iii: Applying Darwinism
Chair: Mike Stuart

16:45-17:15
Marion Blute (University of Toronto at Mississauga)
Darwinism in the Social Sciences Today

17:15-17:45
Howard M. Huynh (Acadia University)
In the Footsteps of Darwin: The Value of Scientific Collecting in
Biodiversity Research and Conservation

17:45-18:15
Joel Velasco (Stanford University)
The Tree of Life: From Darwin to Today

18:15-19:15
Keynote Address: Evelyn Fox Keller
(Massachusetts Institute of Technology)
Darwin as the Newton of a Blade of Grass


Origin of Species at 150: Day One

The conference on Origin of Species at 150 was sponsored by The Institute for the History & Philosophy of Science & Technology, The Department of Ecology and Evolutionary Biology, and The Department of Philosophy at the University of Toronto.

Here's the schedule for the first day.

Sunday November 22, 2009

08:00-09:00 Breakfast

09:00-10:00
Keynote Address: Alison Pearn (Darwin Correspondence Project)
Cast of Thousands: Charles Darwin's Life in Letters

10:00-12:00
Symposium I: Gender, Evolution, and Sexual Selection
Chair: Joan Steigerwald

10:00-10:40
Lisa Lloyd (Indiana University)
Bias in Evolutionary Explanations of the Female Orgasm

10:40-11:20
Marlene Zuk (University of California, Riverside)
Sex and the Scala Naturae

11:20-12:00
Erika Milam (University of Maryland, College Park)
Negotiating Choice: Animal Minds and Human Instincts
in the History of Sexual Selection

12:00-12:30 Lunch Break

12:45-13:45
Session 1.i: Reassessing Themes and Sources
Chair: Michael Cournoyea

12:45-13:15
Scott Sinclair (St. Louis University)
Three American Philosophers’ Response to Darwin

13:15-13:45
Fred Wilson (University of Toronto)
Replacing an Old Paradigm: Intelligent Design and Natural Selection; Hume, Mill, and Darwin

12:45-14:15
Session 1.ii: Social Perceptions
Chair: Jaipreet Virdi

12:45-13:15
Eleanor Louson (University of Toronto)
Nature, Projected: Evolutionary Theory in Wildlife Documentaries

13:15-13:45
David Smillie (University of Toronto)
Evolution and Popular Culture: Darwin on the Box

13:45-14:15
Ian Hesketh (Queen’s University)
Of Apes and Ancestors: Myth and the Cultural Memory of the Oxford Debate of 1860

12:45-14:15
Session 1.iii: Species and Sexuality
Chair: Sebastián Gil-Riaño

12:45-13:15
Masoud Hassanpour Golakani (Macquarie University)
The Spiral Valve Intestine of the Australian Lungfish, a Primitive Characteristic

13:15-13:45
Eugene S. Morton (Hemlock Hill Field Station)
Sexual Conflict and Brood Desertion in Blue-Headed Vireos: How Females Won

13:45-14:15
Jerome Goldsten (San Francisco Clinical Research Center)
The Neurobiology of Sexual Orientation: A Tribute to Charles Darwin

14:30-16:30
Symposium II: Ecology
Chair: Richard Landon
(Coffee/Tea Service Provided)

14:30-15:10
Joan Roughgarden (Stanford University)
Darwin and Ecology

15:10-15:50
Gene Cittadino (New York University)
Reflections on Darwin and Ecology: The History of a Tenuous Relationship

15:50-16:30
Gregory Cooper (Washington and Lee University)
The Darwinian Character of Evolutionary Ecology

16:40-17:40
Keynote Address: James Moore (University of Cambridge)
Darwin’s Progress and the Problem of Slavery

18:00-19:30
Special Presentation
Re: Design: A Dramatisation of the Correspondence between Charles Darwin and Asa Gray (Produced by the Menagerie Theatre Company)


150 Years Ago


On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life was published 150 years ago on November 24, 1859. The publisher, John Murray, had already taken orders for 1,500 copies so the initial printing of 1,250 copies was sold out immediately.
Although much remains obscure, and will long remain obscure, I can entertain no doubt, after the most deliberate study and dispassionate judgment of which I am capable, that the view which most naturalists entertain, and which I formerly entertained—namely, that each species is independently created—is erroneous. I am fully convinced that species are not immutable; but that those belonging to what are called the same genera are lineal descendants of some other and generally extinct species, in the same manner as the acknowledged varieties of any one species are descendants of that species. Furthermore, I am convinced that Natural Selection has been the main but not the exclusive means of modification.